Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.38□□□□□ -0.59
Ebf1Q07802 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.38□□□□□ -0.59
Ebf1Q07802 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.38□□□□□ -0.59
Ebf1Q07802 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ebf1Q07802 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.38□□□□□ -0.59
Ebf1Q07802 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf1Q07802 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.38□□□□□ -0.59
Ebf1Q07802 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ebf1Q07802 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ebf1Q07802 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm15374-201ENSMUST00000119313 844 ntBASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm16030-201ENSMUST00000159098 603 ntBASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm17070-201ENSMUST00000170463 784 ntBASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm24809-201ENSMUST00000175318 271 ntBASIC11.37□□□□□ -0.59
Ebf1Q07802 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm7719-201ENSMUST00000182374 975 ntBASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.37□□□□□ -0.59
Ebf1Q07802 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.37□□□□□ -0.59
Ebf1Q07802 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.37□□□□□ -0.59
Ebf1Q07802 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm5434-202ENSMUST00000222384 1451 ntBASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm5434-201ENSMUST00000071825 1451 ntBASIC11.37□□□□□ -0.59
Ebf1Q07802 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf1Q07802 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf1Q07802 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.36□□□□□ -0.59
Ebf1Q07802 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Mir671-201ENSMUST00000102432 98 ntBASIC11.36□□□□□ -0.59
Ebf1Q07802 Mir453-201ENSMUST00000104732 82 ntBASIC11.36□□□□□ -0.59
Ebf1Q07802 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Gm11578-201ENSMUST00000118530 459 ntBASIC11.36□□□□□ -0.59
Ebf1Q07802 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Gm9507-202ENSMUST00000180157 654 ntBASIC11.36□□□□□ -0.59
Ebf1Q07802 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms