Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC9.55□□□□□ -0.88
Smn1P97801 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.55□□□□□ -0.88
Smn1P97801 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.55□□□□□ -0.88
Smn1P97801 Gm7399-201ENSMUST00000032395 858 ntBASIC9.55□□□□□ -0.88
Smn1P97801 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smn1P97801 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smn1P97801 Gm10478-201ENSMUST00000084451 396 ntBASIC9.55□□□□□ -0.88
Smn1P97801 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smn1P97801 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.55□□□□□ -0.88
Smn1P97801 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Smn1P97801 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smn1P97801 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smn1P97801 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.55□□□□□ -0.88
Smn1P97801 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Smn1P97801 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.54□□□□□ -0.88
Smn1P97801 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Smn1P97801 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Smn1P97801 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Smn1P97801 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Smn1P97801 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Smn1P97801 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Smn1P97801 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.54□□□□□ -0.88
Smn1P97801 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.54□□□□□ -0.88
Smn1P97801 Mir7677-201ENSMUST00000184226 67 ntBASIC9.54□□□□□ -0.88
Smn1P97801 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.54□□□□□ -0.88
Smn1P97801 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 AY702102-202ENSMUST00000194651 1173 ntBASIC9.54□□□□□ -0.88
Smn1P97801 Gm5714-201ENSMUST00000197343 566 ntBASIC9.54□□□□□ -0.88
Smn1P97801 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.54□□□□□ -0.88
Smn1P97801 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.54□□□□□ -0.88
Smn1P97801 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.54□□□□□ -0.88
Smn1P97801 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.54□□□□□ -0.88
Smn1P97801 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC9.54□□□□□ -0.88
Smn1P97801 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Smn1P97801 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Smn1P97801 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Smn1P97801 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.54□□□□□ -0.88
Smn1P97801 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.54□□□□□ -0.88
Smn1P97801 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smn1P97801 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smn1P97801 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smn1P97801 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smn1P97801 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smn1P97801 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.53□□□□□ -0.88
Smn1P97801 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.53□□□□□ -0.88
Smn1P97801 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC9.53□□□□□ -0.88
Smn1P97801 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Smn1P97801 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smn1P97801 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smn1P97801 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smn1P97801 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.53□□□□□ -0.88
Smn1P97801 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smn1P97801 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC9.53□□□□□ -0.88
Smn1P97801 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smn1P97801 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smn1P97801 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smn1P97801 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms