Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CiitaP79621 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CiitaP79621 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.11□□□□□ -0.47
CiitaP79621 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Gm12628-201ENSMUST00000122193 382 ntBASIC12.11□□□□□ -0.47
CiitaP79621 Gm24809-201ENSMUST00000175318 271 ntBASIC12.11□□□□□ -0.47
CiitaP79621 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.11□□□□□ -0.47
CiitaP79621 Gm6439-201ENSMUST00000199849 862 ntBASIC12.11□□□□□ -0.47
CiitaP79621 Gm43912-201ENSMUST00000204352 538 ntBASIC12.11□□□□□ -0.47
CiitaP79621 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CiitaP79621 Gm9111-201ENSMUST00000219394 709 ntBASIC12.11□□□□□ -0.47
CiitaP79621 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CiitaP79621 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CiitaP79621 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.11□□□□□ -0.47
CiitaP79621 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Gm25517-201ENSMUST00000083865 134 ntBASIC12.11□□□□□ -0.47
CiitaP79621 Gm7589-201ENSMUST00000085631 534 ntBASIC12.11□□□□□ -0.47
CiitaP79621 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.11□□□□□ -0.47
CiitaP79621 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.11□□□□□ -0.47
CiitaP79621 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.11□□□□□ -0.47
CiitaP79621 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.11□□□□□ -0.47
CiitaP79621 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CiitaP79621 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.11□□□□□ -0.47
CiitaP79621 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CiitaP79621 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.11□□□□□ -0.47
CiitaP79621 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CiitaP79621 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.1□□□□□ -0.47
CiitaP79621 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.1□□□□□ -0.47
CiitaP79621 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.1□□□□□ -0.47
CiitaP79621 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.1□□□□□ -0.47
CiitaP79621 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
CiitaP79621 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.1□□□□□ -0.47
CiitaP79621 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.1□□□□□ -0.47
CiitaP79621 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.1□□□□□ -0.47
CiitaP79621 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CiitaP79621 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.1□□□□□ -0.47
CiitaP79621 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CiitaP79621 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms