Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm24074-201ENSMUST00000158178 260 ntBASIC12.36□□□□□ -0.43
Hmgb1P63158 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.36□□□□□ -0.43
Hmgb1P63158 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.36□□□□□ -0.43
Hmgb1P63158 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hmgb1P63158 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hmgb1P63158 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.35□□□□□ -0.43
Hmgb1P63158 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.35□□□□□ -0.43
Hmgb1P63158 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm15595-201ENSMUST00000120840 961 ntBASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm43058-201ENSMUST00000197645 625 ntBASIC12.35□□□□□ -0.43
Hmgb1P63158 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.35□□□□□ -0.43
Hmgb1P63158 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.35□□□□□ -0.43
Hmgb1P63158 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hmgb1P63158 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Hmgb1P63158 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.35□□□□□ -0.43
Hmgb1P63158 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.35□□□□□ -0.43
Hmgb1P63158 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hmgb1P63158 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgb1P63158 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Hmgb1P63158 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Hmgb1P63158 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Hmgb1P63158 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.34□□□□□ -0.43
Hmgb1P63158 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.34□□□□□ -0.43
Hmgb1P63158 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Exosc10-201ENSMUST00000017408 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Hmgb1P63158 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Gm25148-201ENSMUST00000104611 123 ntBASIC12.34□□□□□ -0.43
Hmgb1P63158 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.34□□□□□ -0.43
Hmgb1P63158 Gm15374-201ENSMUST00000119313 844 ntBASIC12.34□□□□□ -0.43
Hmgb1P63158 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.34□□□□□ -0.43
Hmgb1P63158 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Hmgb1P63158 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hmgb1P63158 Gm5302-201ENSMUST00000202130 796 ntBASIC12.34□□□□□ -0.43
Hmgb1P63158 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Hmgb1P63158 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.34□□□□□ -0.43
Hmgb1P63158 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.34□□□□□ -0.43
Hmgb1P63158 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms