Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Gm14592-201ENSMUST00000117201 560 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 Gm11957-201ENSMUST00000118304 779 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 Gm15136-201ENSMUST00000120552 533 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Lmo4P61969 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC9.02□□□□□ -0.97
Lmo4P61969 Gm18014-201ENSMUST00000183369 817 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Gm37852-201ENSMUST00000193027 350 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 Gm42433-201ENSMUST00000196806 940 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Gm43506-201ENSMUST00000200675 753 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 Gm6855-201ENSMUST00000206307 790 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC9.02□□□□□ -0.97
Lmo4P61969 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC9.02□□□□□ -0.97
Lmo4P61969 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC9.02□□□□□ -0.97
Lmo4P61969 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC9.02□□□□□ -0.97
Lmo4P61969 AC162932.1-201ENSMUST00000219209 872 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 BC106175-202ENSMUST00000219344 1213 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 AC164429.1-201ENSMUST00000224210 518 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC9.02□□□□□ -0.97
Lmo4P61969 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Lmo4P61969 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.02□□□□□ -0.97
Lmo4P61969 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Lmo4P61969 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Lmo4P61969 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.01□□□□□ -0.97
Lmo4P61969 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Lmo4P61969 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Lmo4P61969 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC9.01□□□□□ -0.97
Lmo4P61969 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Lmo4P61969 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Lmo4P61969 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Lmo4P61969 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Lmo4P61969 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Lmo4P61969 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Gm18733-202ENSMUST00000174447 401 ntBASIC9.01□□□□□ -0.97
Lmo4P61969 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Lmo4P61969 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC9.01□□□□□ -0.97
Lmo4P61969 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Lmo4P61969 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Lmo4P61969 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Lmo4P61969 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Lmo4P61969 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC9.01□□□□□ -0.97
Lmo4P61969 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC9.01□□□□□ -0.97
Lmo4P61969 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.01□□□□□ -0.97
Lmo4P61969 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.01□□□□□ -0.97
Lmo4P61969 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Lmo4P61969 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Lmo4P61969 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.01□□□□□ -0.97
Lmo4P61969 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms