Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a1P61620 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.87□□□□□ -0.83
Sec61a1P61620 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a1P61620 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.87□□□□□ -0.83
Sec61a1P61620 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a1P61620 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a1P61620 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a1P61620 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.87□□□□□ -0.83
Sec61a1P61620 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.87□□□□□ -0.83
Sec61a1P61620 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a1P61620 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.87□□□□□ -0.83
Sec61a1P61620 Gm37246-201ENSMUST00000192665 835 ntBASIC9.87□□□□□ -0.83
Sec61a1P61620 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.87□□□□□ -0.83
Sec61a1P61620 Gm6439-201ENSMUST00000199849 862 ntBASIC9.87□□□□□ -0.83
Sec61a1P61620 Gm9797-202ENSMUST00000218003 294 ntBASIC9.87□□□□□ -0.83
Sec61a1P61620 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Sec61a1P61620 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a1P61620 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.87□□□□□ -0.83
Sec61a1P61620 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a1P61620 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.87□□□□□ -0.83
Sec61a1P61620 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a1P61620 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Sec61a1P61620 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.86□□□□□ -0.83
Sec61a1P61620 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Sec61a1P61620 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm13611-201ENSMUST00000118269 318 ntBASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm12176-201ENSMUST00000121420 875 ntBASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Sec61a1P61620 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm22902-201ENSMUST00000158488 302 ntBASIC9.86□□□□□ -0.83
Sec61a1P61620 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm8343-201ENSMUST00000182705 994 ntBASIC9.86□□□□□ -0.83
Sec61a1P61620 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm5733-201ENSMUST00000190232 939 ntBASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.86□□□□□ -0.83
Sec61a1P61620 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm42997-202ENSMUST00000200321 985 ntBASIC9.86□□□□□ -0.83
Sec61a1P61620 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Sec61a1P61620 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.86□□□□□ -0.83
Sec61a1P61620 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.86□□□□□ -0.83
Sec61a1P61620 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a1P61620 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.86□□□□□ -0.83
Sec61a1P61620 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a1P61620 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a1P61620 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.85□□□□□ -0.83
Sec61a1P61620 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Sec61a1P61620 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms