Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Mir291b-201ENSMUST00000104838 79 ntBASIC14□□□□□ -0.17
Vps33bP59016 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC14□□□□□ -0.17
Vps33bP59016 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC14□□□□□ -0.17
Vps33bP59016 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Vps33bP59016 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 AC163646.3-202ENSMUST00000228685 691 ntBASIC14□□□□□ -0.17
Vps33bP59016 AC141884.2-201ENSMUST00000228811 775 ntBASIC14□□□□□ -0.17
Vps33bP59016 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Gm45719-201ENSMUST00000207954 1662 ntBASIC14□□□□□ -0.17
Vps33bP59016 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14□□□□□ -0.17
Vps33bP59016 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps33bP59016 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Gm42833-201ENSMUST00000196019 2124 ntBASIC13.99□□□□□ -0.17
Vps33bP59016 Gm15599-201ENSMUST00000122283 1345 ntBASIC13.99□□□□□ -0.17
Vps33bP59016 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.99□□□□□ -0.17
Vps33bP59016 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Vps33bP59016 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC13.99□□□□□ -0.17
Vps33bP59016 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vps33bP59016 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC13.99□□□□□ -0.17
Vps33bP59016 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vps33bP59016 Krtap6-3-201ENSMUST00000079151 444 ntBASIC13.99□□□□□ -0.17
Vps33bP59016 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Vps33bP59016 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vps33bP59016 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vps33bP59016 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Vps33bP59016 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps33bP59016 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vps33bP59016 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vps33bP59016 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC13.98□□□□□ -0.17
Vps33bP59016 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC13.98□□□□□ -0.17
Vps33bP59016 Gm24346-201ENSMUST00000158712 194 ntBASIC13.98□□□□□ -0.17
Vps33bP59016 Gm5244-201ENSMUST00000164001 339 ntBASIC13.98□□□□□ -0.17
Vps33bP59016 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC13.98□□□□□ -0.17
Vps33bP59016 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vps33bP59016 Gm18391-201ENSMUST00000217189 658 ntBASIC13.98□□□□□ -0.17
Vps33bP59016 Gm8768-201ENSMUST00000220020 826 ntBASIC13.98□□□□□ -0.17
Vps33bP59016 AC134860.2-201ENSMUST00000225277 1036 ntBASIC13.98□□□□□ -0.17
Vps33bP59016 AC153153.1-201ENSMUST00000225803 793 ntBASIC13.98□□□□□ -0.17
Vps33bP59016 AC174647.1-201ENSMUST00000227419 1271 ntBASIC13.98□□□□□ -0.17
Vps33bP59016 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Gm16477-201ENSMUST00000085365 801 ntBASIC13.98□□□□□ -0.17
Vps33bP59016 Gm17415-201ENSMUST00000096427 789 ntBASIC13.98□□□□□ -0.17
Vps33bP59016 Gm10617-201ENSMUST00000098368 1172 ntBASIC13.98□□□□□ -0.17
Vps33bP59016 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps33bP59016 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms