Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
NrlP54846 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NrlP54846 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NrlP54846 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.92□□□□□ -0.5
NrlP54846 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NrlP54846 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NrlP54846 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.91□□□□□ -0.5
NrlP54846 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.91□□□□□ -0.5
NrlP54846 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.91□□□□□ -0.5
NrlP54846 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
NrlP54846 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.91□□□□□ -0.5
NrlP54846 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
NrlP54846 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.91□□□□□ -0.5
NrlP54846 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Gm20414-201ENSMUST00000172918 646 ntBASIC11.91□□□□□ -0.5
NrlP54846 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.91□□□□□ -0.5
NrlP54846 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Gm42433-201ENSMUST00000196806 940 ntBASIC11.91□□□□□ -0.5
NrlP54846 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC11.91□□□□□ -0.5
NrlP54846 Gm43002-201ENSMUST00000200310 155 ntBASIC11.91□□□□□ -0.5
NrlP54846 Gm29763-201ENSMUST00000205306 616 ntBASIC11.91□□□□□ -0.5
NrlP54846 Gm18035-201ENSMUST00000211962 589 ntBASIC11.91□□□□□ -0.5
NrlP54846 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Gm9102-201ENSMUST00000219250 465 ntBASIC11.91□□□□□ -0.5
NrlP54846 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
NrlP54846 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
NrlP54846 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.91□□□□□ -0.5
NrlP54846 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.91□□□□□ -0.5
NrlP54846 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.91□□□□□ -0.5
NrlP54846 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NrlP54846 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
NrlP54846 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.9□□□□□ -0.5
NrlP54846 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.9□□□□□ -0.5
NrlP54846 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.9□□□□□ -0.5
NrlP54846 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
NrlP54846 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Mir671-201ENSMUST00000102432 98 ntBASIC11.9□□□□□ -0.5
NrlP54846 Gm25562-201ENSMUST00000104608 133 ntBASIC11.9□□□□□ -0.5
NrlP54846 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
NrlP54846 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
NrlP54846 Gm9133-201ENSMUST00000118289 540 ntBASIC11.9□□□□□ -0.5
NrlP54846 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC11.9□□□□□ -0.5
NrlP54846 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NrlP54846 Olfml3-204ENSMUST00000169286 874 ntBASIC11.9□□□□□ -0.5
NrlP54846 Gm25677-201ENSMUST00000174983 72 ntBASIC11.9□□□□□ -0.5
NrlP54846 Gm23400-201ENSMUST00000174994 102 ntBASIC11.9□□□□□ -0.5
NrlP54846 Gm26463-201ENSMUST00000175065 101 ntBASIC11.9□□□□□ -0.5
NrlP54846 Gm24332-201ENSMUST00000175102 102 ntBASIC11.9□□□□□ -0.5
NrlP54846 Gm25959-201ENSMUST00000175112 102 ntBASIC11.9□□□□□ -0.5
NrlP54846 Gm22475-201ENSMUST00000175169 102 ntBASIC11.9□□□□□ -0.5
NrlP54846 Gm22903-201ENSMUST00000175193 102 ntBASIC11.9□□□□□ -0.5
NrlP54846 Gm25070-201ENSMUST00000175237 102 ntBASIC11.9□□□□□ -0.5
NrlP54846 Gm24159-201ENSMUST00000175264 102 ntBASIC11.9□□□□□ -0.5
NrlP54846 Gm25299-201ENSMUST00000175283 102 ntBASIC11.9□□□□□ -0.5
NrlP54846 Gm23798-201ENSMUST00000175560 102 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms