Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gm14993-201ENSMUST00000121180 164 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gm9369-201ENSMUST00000196009 733 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gm6390-201ENSMUST00000215034 589 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.6□□□□□ -0.71
Nkx2-6P43688 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-6P43688 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.59□□□□□ -0.71
Nkx2-6P43688 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Gm6158-201ENSMUST00000109467 904 ntBASIC10.59□□□□□ -0.71
Nkx2-6P43688 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Gm12389-201ENSMUST00000117696 418 ntBASIC10.59□□□□□ -0.71
Nkx2-6P43688 Gm12969-201ENSMUST00000120199 1004 ntBASIC10.59□□□□□ -0.71
Nkx2-6P43688 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Nkx2-6P43688 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms