Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Gm12986-201ENSMUST00000119037 967 ntBASIC10.22□□□□□ -0.77
Nkx2-2P42586 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Gm11573-201ENSMUST00000119956 394 ntBASIC10.22□□□□□ -0.77
Nkx2-2P42586 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Gm9550-201ENSMUST00000161130 862 ntBASIC10.22□□□□□ -0.77
Nkx2-2P42586 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Platr10-202ENSMUST00000191479 818 ntBASIC10.22□□□□□ -0.77
Nkx2-2P42586 Gm37986-201ENSMUST00000193285 383 ntBASIC10.22□□□□□ -0.77
Nkx2-2P42586 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Gm25125-201ENSMUST00000083340 136 ntBASIC10.22□□□□□ -0.77
Nkx2-2P42586 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.22□□□□□ -0.77
Nkx2-2P42586 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-2P42586 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.21□□□□□ -0.77
Nkx2-2P42586 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.21□□□□□ -0.77
Nkx2-2P42586 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.21□□□□□ -0.77
Nkx2-2P42586 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Mir1943-201ENSMUST00000158276 73 ntBASIC10.21□□□□□ -0.77
Nkx2-2P42586 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Snord55-201ENSMUST00000174939 79 ntBASIC10.21□□□□□ -0.77
Nkx2-2P42586 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Nkx2-2P42586 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.21□□□□□ -0.77
Nkx2-2P42586 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.21□□□□□ -0.77
Nkx2-2P42586 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx2-2P42586 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms