Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 AC154528.2-201ENSMUST00000228432 3023 ntBASIC13.7□□□□□ -0.22
Nkx1-2P42580 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Bcl2-202ENSMUST00000189999 2841 ntBASIC13.7□□□□□ -0.22
Nkx1-2P42580 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Gm22920-201ENSMUST00000102175 109 ntBASIC13.7□□□□□ -0.22
Nkx1-2P42580 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Snord17-201ENSMUST00000104526 238 ntBASIC13.7□□□□□ -0.22
Nkx1-2P42580 Gm4294-201ENSMUST00000105169 614 ntBASIC13.7□□□□□ -0.22
Nkx1-2P42580 Gm12217-201ENSMUST00000118858 696 ntBASIC13.7□□□□□ -0.22
Nkx1-2P42580 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.7□□□□□ -0.22
Nkx1-2P42580 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Gm42867-201ENSMUST00000202995 469 ntBASIC13.7□□□□□ -0.22
Nkx1-2P42580 Gm8574-201ENSMUST00000203207 924 ntBASIC13.7□□□□□ -0.22
Nkx1-2P42580 Gm44506-201ENSMUST00000206278 965 ntBASIC13.7□□□□□ -0.22
Nkx1-2P42580 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nkx1-2P42580 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx1-2P42580 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm8320-201ENSMUST00000177584 1762 ntBASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm8303-201ENSMUST00000178371 1762 ntBASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm8331-201ENSMUST00000178433 1762 ntBASIC13.69□□□□□ -0.22
Nkx1-2P42580 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.69□□□□□ -0.22
Nkx1-2P42580 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm23251-201ENSMUST00000103773 110 ntBASIC13.69□□□□□ -0.22
Nkx1-2P42580 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm25732-201ENSMUST00000175168 60 ntBASIC13.69□□□□□ -0.22
Nkx1-2P42580 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Olfr584-201ENSMUST00000098210 964 ntBASIC13.69□□□□□ -0.22
Nkx1-2P42580 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm43307-201ENSMUST00000199465 2371 ntBASIC13.69□□□□□ -0.22
Nkx1-2P42580 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.69□□□□□ -0.22
Nkx1-2P42580 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx1-2P42580 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms