Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC11.52□□□□□ -0.57
Cxcl12P40224 Gm5424-201ENSMUST00000053865 1240 ntBASIC11.52□□□□□ -0.57
Cxcl12P40224 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.52□□□□□ -0.57
Cxcl12P40224 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Gm4778-201ENSMUST00000098878 1098 ntBASIC11.52□□□□□ -0.57
Cxcl12P40224 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.52□□□□□ -0.57
Cxcl12P40224 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Gm8968-201ENSMUST00000199133 1303 ntBASIC11.52□□□□□ -0.57
Cxcl12P40224 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
Cxcl12P40224 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.52□□□□□ -0.57
Cxcl12P40224 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cxcl12P40224 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cxcl12P40224 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cxcl12P40224 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm15626-201ENSMUST00000117478 868 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm13688-201ENSMUST00000121557 608 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm14699-201ENSMUST00000122340 228 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm16441-201ENSMUST00000138176 924 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm6038-201ENSMUST00000154310 948 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm25591-201ENSMUST00000177317 94 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 BB187690-201ENSMUST00000198619 1176 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm9353-201ENSMUST00000200472 604 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm5738-201ENSMUST00000206016 779 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC11.51□□□□□ -0.57
Cxcl12P40224 AC124356.1-201ENSMUST00000221469 698 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 AC133517.1-201ENSMUST00000225825 594 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cxcl12P40224 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.51□□□□□ -0.57
Cxcl12P40224 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cxcl12P40224 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cxcl12P40224 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cxcl12P40224 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cxcl12P40224 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Gm14176-201ENSMUST00000121302 477 ntBASIC11.5□□□□□ -0.57
Cxcl12P40224 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms