Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Upk2P38575 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Upk2P38575 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Upk2P38575 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Upk2P38575 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Upk2P38575 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.78□□□□□ -0.84
Upk2P38575 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Upk2P38575 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.78□□□□□ -0.84
Upk2P38575 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.78□□□□□ -0.84
Upk2P38575 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.78□□□□□ -0.84
Upk2P38575 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.78□□□□□ -0.84
Upk2P38575 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Upk2P38575 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Upk2P38575 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Upk2P38575 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.78□□□□□ -0.84
Upk2P38575 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Upk2P38575 Gm25076-201ENSMUST00000104098 132 ntBASIC9.78□□□□□ -0.84
Upk2P38575 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Upk2P38575 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.78□□□□□ -0.84
Upk2P38575 B9d1os-201ENSMUST00000137010 674 ntBASIC9.78□□□□□ -0.84
Upk2P38575 Gm15881-201ENSMUST00000148792 942 ntBASIC9.78□□□□□ -0.84
Upk2P38575 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Upk2P38575 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Upk2P38575 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC9.78□□□□□ -0.84
Upk2P38575 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Upk2P38575 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Upk2P38575 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.78□□□□□ -0.84
Upk2P38575 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.78□□□□□ -0.84
Upk2P38575 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.78□□□□□ -0.84
Upk2P38575 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.78□□□□□ -0.84
Upk2P38575 AC158355.1-201ENSMUST00000215895 1705 ntBASIC9.78□□□□□ -0.84
Upk2P38575 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Upk2P38575 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.78□□□□□ -0.84
Upk2P38575 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.78□□□□□ -0.84
Upk2P38575 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Upk2P38575 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Upk2P38575 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Upk2P38575 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Upk2P38575 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Upk2P38575 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
Upk2P38575 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Upk2P38575 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Upk2P38575 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Upk2P38575 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Upk2P38575 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Upk2P38575 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Upk2P38575 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.77□□□□□ -0.85
Upk2P38575 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Upk2P38575 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.77□□□□□ -0.85
Upk2P38575 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Upk2P38575 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Gm13611-201ENSMUST00000118269 318 ntBASIC9.77□□□□□ -0.85
Upk2P38575 Gm11331-201ENSMUST00000119764 288 ntBASIC9.77□□□□□ -0.85
Upk2P38575 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Gm20426-201ENSMUST00000173657 440 ntBASIC9.77□□□□□ -0.85
Upk2P38575 Gm28032-201ENSMUST00000184104 96 ntBASIC9.77□□□□□ -0.85
Upk2P38575 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC9.77□□□□□ -0.85
Upk2P38575 Gm30946-201ENSMUST00000198288 724 ntBASIC9.77□□□□□ -0.85
Upk2P38575 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms