Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nedd8P29595 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Nedd8P29595 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.23□□□□□ -0.77
Nedd8P29595 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Nedd8P29595 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm4986-201ENSMUST00000119731 549 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm24548-201ENSMUST00000158650 108 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.23□□□□□ -0.77
Nedd8P29595 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Nedd8P29595 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.23□□□□□ -0.77
Nedd8P29595 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.23□□□□□ -0.77
Nedd8P29595 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.23□□□□□ -0.77
Nedd8P29595 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Nedd8P29595 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Gm2546-201ENSMUST00000182630 991 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm27847-201ENSMUST00000183711 107 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Gm27375-201ENSMUST00000183799 107 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Gm37301-201ENSMUST00000195412 568 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Rps4l-202ENSMUST00000204242 789 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.23□□□□□ -0.77
Nedd8P29595 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.23□□□□□ -0.77
Nedd8P29595 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC10.23□□□□□ -0.77
Nedd8P29595 AC144938.1-201ENSMUST00000223994 2167 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC10.23□□□□□ -0.77
Nedd8P29595 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Nedd8P29595 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.23□□□□□ -0.77
Nedd8P29595 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.22□□□□□ -0.77
Nedd8P29595 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nedd8P29595 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nedd8P29595 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nedd8P29595 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Gm7488-201ENSMUST00000117148 684 ntBASIC10.22□□□□□ -0.77
Nedd8P29595 Gm11918-201ENSMUST00000121660 179 ntBASIC10.22□□□□□ -0.77
Nedd8P29595 Gm13316-201ENSMUST00000140537 691 ntBASIC10.22□□□□□ -0.77
Nedd8P29595 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.22□□□□□ -0.77
Nedd8P29595 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.22□□□□□ -0.77
Nedd8P29595 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nedd8P29595 Gm45384-201ENSMUST00000210451 277 ntBASIC10.22□□□□□ -0.77
Nedd8P29595 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.22□□□□□ -0.77
Nedd8P29595 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.22□□□□□ -0.77
Nedd8P29595 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nedd8P29595 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nedd8P29595 Gm2423-201ENSMUST00000074863 733 ntBASIC10.22□□□□□ -0.77
Nedd8P29595 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nedd8P29595 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms