Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.18□□□□□ -0.62
Nckap1P28660 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nckap1P28660 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nckap1P28660 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nckap1P28660 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nckap1P28660 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nckap1P28660 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nckap1P28660 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nckap1P28660 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Gm9133-201ENSMUST00000118289 540 ntBASIC11.17□□□□□ -0.62
Nckap1P28660 Gm12783-201ENSMUST00000121425 397 ntBASIC11.17□□□□□ -0.62
Nckap1P28660 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.17□□□□□ -0.62
Nckap1P28660 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.17□□□□□ -0.62
Nckap1P28660 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Nckap1P28660 Gm19246-201ENSMUST00000173599 255 ntBASIC11.17□□□□□ -0.62
Nckap1P28660 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.17□□□□□ -0.62
Nckap1P28660 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Gm42867-201ENSMUST00000202995 469 ntBASIC11.17□□□□□ -0.62
Nckap1P28660 Gm44647-201ENSMUST00000207402 428 ntBASIC11.17□□□□□ -0.62
Nckap1P28660 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.17□□□□□ -0.62
Nckap1P28660 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.17□□□□□ -0.62
Nckap1P28660 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.17□□□□□ -0.62
Nckap1P28660 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nckap1P28660 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Nckap1P28660 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.17□□□□□ -0.62
Nckap1P28660 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Nckap1P28660 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.17□□□□□ -0.62
Nckap1P28660 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Nckap1P28660 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nckap1P28660 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nckap1P28660 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Nckap1P28660 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.16□□□□□ -0.62
Nckap1P28660 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.16□□□□□ -0.62
Nckap1P28660 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nckap1P28660 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nckap1P28660 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Gm13284-201ENSMUST00000121020 547 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nckap1P28660 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nckap1P28660 Gm8723-201ENSMUST00000166076 820 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Gm17192-201ENSMUST00000169031 511 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Gm8701-201ENSMUST00000169259 874 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nckap1P28660 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nckap1P28660 Gm19587-201ENSMUST00000191395 545 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Gm44216-201ENSMUST00000203942 157 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Gm18463-201ENSMUST00000207258 474 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Gm2594-201ENSMUST00000214774 742 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Gm8255-201ENSMUST00000218693 305 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nckap1P28660 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nckap1P28660 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.16□□□□□ -0.62
Nckap1P28660 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nckap1P28660 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms