Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1bP25119 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm11451-201ENSMUST00000118946 630 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm12516-201ENSMUST00000120819 385 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm3344-201ENSMUST00000169610 603 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm19246-201ENSMUST00000173599 255 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm25026-201ENSMUST00000175017 188 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm8285-201ENSMUST00000208293 759 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm18556-201ENSMUST00000219748 1031 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm10263-201ENSMUST00000085163 300 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms