Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gm43002-201ENSMUST00000200310 155 ntBASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Gm43852-201ENSMUST00000202098 917 ntBASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Gm5996-201ENSMUST00000211110 718 ntBASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.63□□□□□ -0.87
Ly6c1P0CW02 AC159293.2-201ENSMUST00000222289 424 ntBASIC9.63□□□□□ -0.87
Ly6c1P0CW02 AC129219.2-201ENSMUST00000224324 701 ntBASIC9.63□□□□□ -0.87
Ly6c1P0CW02 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ly6c1P0CW02 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm12616-201ENSMUST00000118594 382 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm8261-201ENSMUST00000119275 1208 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm14585-201ENSMUST00000120713 634 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm15329-201ENSMUST00000121408 155 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm15549-201ENSMUST00000121595 622 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm12624-201ENSMUST00000177615 382 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm12621-201ENSMUST00000177760 382 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm12615-201ENSMUST00000177970 382 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm12622-201ENSMUST00000177975 382 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm12627-201ENSMUST00000178412 382 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm12625-201ENSMUST00000179122 382 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm12614-201ENSMUST00000179586 382 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm12613-201ENSMUST00000180323 382 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm36997-201ENSMUST00000195090 707 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm44126-201ENSMUST00000204831 514 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm8342-201ENSMUST00000209839 757 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 AC161426.1-201ENSMUST00000214137 286 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 AC162934.3-201ENSMUST00000223015 841 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 AC105408.1-201ENSMUST00000227771 802 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Desi2-202ENSMUST00000069568 1193 ntBASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ly6c1P0CW02 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.61□□□□□ -0.87
Ly6c1P0CW02 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ly6c1P0CW02 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms