Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC9.03□□□□□ -0.96
Hoxd3P09027 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC9.03□□□□□ -0.96
Hoxd3P09027 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.03□□□□□ -0.96
Hoxd3P09027 AC126673.2-201ENSMUST00000221052 686 ntBASIC9.03□□□□□ -0.96
Hoxd3P09027 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.03□□□□□ -0.96
Hoxd3P09027 AC164597.1-201ENSMUST00000226538 514 ntBASIC9.03□□□□□ -0.96
Hoxd3P09027 CT030652.1-201ENSMUST00000227377 1235 ntBASIC9.03□□□□□ -0.96
Hoxd3P09027 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.03□□□□□ -0.96
Hoxd3P09027 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Hoxd3P09027 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Hoxd3P09027 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Hoxd3P09027 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Hoxd3P09027 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.03□□□□□ -0.96
Hoxd3P09027 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Hoxd3P09027 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxd3P09027 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
Hoxd3P09027 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Hoxd3P09027 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.02□□□□□ -0.96
Hoxd3P09027 Gm37396-201ENSMUST00000191827 1495 ntBASIC9.02□□□□□ -0.96
Hoxd3P09027 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Hoxd3P09027 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Hoxd3P09027 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Hoxd3P09027 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Hoxd3P09027 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Hoxd3P09027 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.02□□□□□ -0.96
Hoxd3P09027 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Hoxd3P09027 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm15530-201ENSMUST00000122206 555 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm23045-201ENSMUST00000175041 96 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.02□□□□□ -0.97
Hoxd3P09027 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm37241-201ENSMUST00000191736 523 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC9.02□□□□□ -0.97
Hoxd3P09027 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm43852-201ENSMUST00000202098 917 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Gm45398-201ENSMUST00000210561 165 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC9.02□□□□□ -0.97
Hoxd3P09027 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 AC122876.1-201ENSMUST00000217619 825 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Hoxd3P09027 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxd3P09027 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.02□□□□□ -0.97
Hoxd3P09027 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms