Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.5□□□□□ -0.57
CopeO89079 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.5□□□□□ -0.57
CopeO89079 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.5□□□□□ -0.57
CopeO89079 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.5□□□□□ -0.57
CopeO89079 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CopeO89079 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CopeO89079 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CopeO89079 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC11.5□□□□□ -0.57
CopeO89079 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CopeO89079 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CopeO89079 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.5□□□□□ -0.57
CopeO89079 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.49□□□□□ -0.57
CopeO89079 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.49□□□□□ -0.57
CopeO89079 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.49□□□□□ -0.57
CopeO89079 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.49□□□□□ -0.57
CopeO89079 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CopeO89079 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CopeO89079 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.49□□□□□ -0.57
CopeO89079 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.49□□□□□ -0.57
CopeO89079 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
CopeO89079 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CopeO89079 Gm8100-201ENSMUST00000182906 988 ntBASIC11.49□□□□□ -0.57
CopeO89079 Gm27530-201ENSMUST00000184096 98 ntBASIC11.49□□□□□ -0.57
CopeO89079 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.49□□□□□ -0.57
CopeO89079 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.49□□□□□ -0.57
CopeO89079 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Gm3961-201ENSMUST00000204425 994 ntBASIC11.49□□□□□ -0.57
CopeO89079 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
CopeO89079 Gm8342-201ENSMUST00000209839 757 ntBASIC11.49□□□□□ -0.57
CopeO89079 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.49□□□□□ -0.57
CopeO89079 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.49□□□□□ -0.57
CopeO89079 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CopeO89079 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CopeO89079 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.48□□□□□ -0.57
CopeO89079 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CopeO89079 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.48□□□□□ -0.57
CopeO89079 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.48□□□□□ -0.57
CopeO89079 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
CopeO89079 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
CopeO89079 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.48□□□□□ -0.57
CopeO89079 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Gm13263-201ENSMUST00000121271 838 ntBASIC11.48□□□□□ -0.57
CopeO89079 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.48□□□□□ -0.57
CopeO89079 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.48□□□□□ -0.57
CopeO89079 Gm25881-201ENSMUST00000157783 103 ntBASIC11.48□□□□□ -0.57
CopeO89079 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.48□□□□□ -0.57
CopeO89079 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.48□□□□□ -0.57
CopeO89079 Gm27320-201ENSMUST00000184892 109 ntBASIC11.48□□□□□ -0.57
CopeO89079 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CopeO89079 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.48□□□□□ -0.57
CopeO89079 Gm37301-201ENSMUST00000195412 568 ntBASIC11.48□□□□□ -0.57
CopeO89079 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.48□□□□□ -0.57
CopeO89079 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.48□□□□□ -0.57
CopeO89079 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.48□□□□□ -0.57
CopeO89079 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
CopeO89079 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms