Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Itgb3O54890 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Itgb3O54890 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Mir453-201ENSMUST00000104732 82 ntBASIC11.84□□□□□ -0.51
Itgb3O54890 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.84□□□□□ -0.51
Itgb3O54890 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.84□□□□□ -0.51
Itgb3O54890 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.84□□□□□ -0.51
Itgb3O54890 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.84□□□□□ -0.51
Itgb3O54890 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.84□□□□□ -0.51
Itgb3O54890 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.84□□□□□ -0.51
Itgb3O54890 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.84□□□□□ -0.51
Itgb3O54890 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.84□□□□□ -0.51
Itgb3O54890 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.84□□□□□ -0.51
Itgb3O54890 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.84□□□□□ -0.51
Itgb3O54890 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.84□□□□□ -0.51
Itgb3O54890 Gm43671-201ENSMUST00000200422 433 ntBASIC11.84□□□□□ -0.51
Itgb3O54890 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.84□□□□□ -0.51
Itgb3O54890 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Itgb3O54890 Gm7082-201ENSMUST00000209880 969 ntBASIC11.84□□□□□ -0.51
Itgb3O54890 Gm18968-201ENSMUST00000221319 862 ntBASIC11.84□□□□□ -0.51
Itgb3O54890 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Itgb3O54890 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Itgb3O54890 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Itgb3O54890 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Itgb3O54890 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Itgb3O54890 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Itgb3O54890 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Itgb3O54890 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.83□□□□□ -0.51
Itgb3O54890 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Itgb3O54890 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.83□□□□□ -0.52
Itgb3O54890 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Itgb3O54890 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Itgb3O54890 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.83□□□□□ -0.52
Itgb3O54890 Gm12663-201ENSMUST00000118481 958 ntBASIC11.83□□□□□ -0.52
Itgb3O54890 Gm3828-201ENSMUST00000121817 257 ntBASIC11.83□□□□□ -0.52
Itgb3O54890 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.83□□□□□ -0.52
Itgb3O54890 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.83□□□□□ -0.52
Itgb3O54890 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Gm9135-201ENSMUST00000182963 990 ntBASIC11.83□□□□□ -0.52
Itgb3O54890 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.83□□□□□ -0.52
Itgb3O54890 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.83□□□□□ -0.52
Itgb3O54890 Gm19091-201ENSMUST00000208120 978 ntBASIC11.83□□□□□ -0.52
Itgb3O54890 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Itgb3O54890 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.83□□□□□ -0.52
Itgb3O54890 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.83□□□□□ -0.52
Itgb3O54890 Gm5805-201ENSMUST00000072779 456 ntBASIC11.83□□□□□ -0.52
Itgb3O54890 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.83□□□□□ -0.52
Itgb3O54890 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Itgb3O54890 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Itgb3O54890 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Itgb3O54890 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Itgb3O54890 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.82□□□□□ -0.52
Itgb3O54890 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Itgb3O54890 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Itgb3O54890 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Itgb3O54890 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Itgb3O54890 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Itgb3O54890 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Itgb3O54890 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Itgb3O54890 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.82□□□□□ -0.52
Itgb3O54890 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Itgb3O54890 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Itgb3O54890 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Itgb3O54890 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms