Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Gm5254-201ENSMUST00000188353 977 ntBASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Gm42710-201ENSMUST00000200608 985 ntBASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Arhgef33-210ENSMUST00000225548 456 ntBASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Gm16305-201ENSMUST00000140747 556 ntBASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Gm26174-201ENSMUST00000158415 219 ntBASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Gm7985-201ENSMUST00000183329 981 ntBASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Gm38349-201ENSMUST00000195732 462 ntBASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Gm43811-201ENSMUST00000202862 695 ntBASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Gm45745-201ENSMUST00000211447 1180 ntBASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Gm10238-201ENSMUST00000089689 408 ntBASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc180J3QNE4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Gm12950-201ENSMUST00000121683 417 ntBASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Gm42859-201ENSMUST00000199572 193 ntBASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Gfra2-203ENSMUST00000227697 1323 ntBASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Gm6291-201ENSMUST00000179994 309 ntBASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Gm6216-201ENSMUST00000182390 687 ntBASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Zcwpw2-203ENSMUST00000187803 372 ntBASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Gm8226-201ENSMUST00000190511 798 ntBASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 AC124613.1-201ENSMUST00000198711 88 ntBASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 AC154477.1-201ENSMUST00000226515 773 ntBASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 AC137842.2-201ENSMUST00000227734 797 ntBASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc180J3QNE4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Gm38055-201ENSMUST00000195353 2217 ntBASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 AC122811.1-201ENSMUST00000222257 2921 ntBASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Gm13326-201ENSMUST00000118730 1011 ntBASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Gm24140-201ENSMUST00000122773 326 ntBASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Gm43097-201ENSMUST00000196867 151 ntBASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Gm8796-201ENSMUST00000219122 936 ntBASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Atf7-201ENSMUST00000096143 390 ntBASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms