Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Hyal2-206ENSMUST00000195681 2968 ntBASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm15617-201ENSMUST00000118973 771 ntBASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm14660-201ENSMUST00000119809 575 ntBASIC8.98□□□□□ -0.97
Gm12887B1AVM1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 H2-Pa-201ENSMUST00000182803 626 ntBASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm45113-201ENSMUST00000207518 165 ntBASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm17823-201ENSMUST00000217830 1006 ntBASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm9797-202ENSMUST00000218003 294 ntBASIC8.98□□□□□ -0.97
Gm12887B1AVM1 AC122891.1-201ENSMUST00000218671 268 ntBASIC8.98□□□□□ -0.97
Gm12887B1AVM1 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 AC154461.3-201ENSMUST00000224831 573 ntBASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Gm28424-201ENSMUST00000187393 1319 ntBASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gm15207-201ENSMUST00000119259 442 ntBASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gm11783-201ENSMUST00000119549 885 ntBASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC8.97□□□□□ -0.97
Gm12887B1AVM1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gm22846-201ENSMUST00000157706 270 ntBASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gm24074-201ENSMUST00000158178 260 ntBASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gm5342-201ENSMUST00000181982 1003 ntBASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gm45784-201ENSMUST00000188360 142 ntBASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gm6266-201ENSMUST00000203844 806 ntBASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gm30285-201ENSMUST00000214614 422 ntBASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Gm44913-201ENSMUST00000208060 2990 ntBASIC8.97□□□□□ -0.97
Gm12887B1AVM1 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Gm12887B1AVM1 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms