Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Mir432-201ENSMUST00000157230 75 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm28671-201ENSMUST00000187036 692 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm37782-201ENSMUST00000194879 678 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm6794-201ENSMUST00000203829 457 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Scn3aA2ASI5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.35□□□□□ -0.43
Scn3aA2ASI5 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Gm42751-201ENSMUST00000198065 559 ntBASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms