Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Crlf3Q9Z2L7 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gm13296-201ENSMUST00000117854 997 ntBASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gm11573-201ENSMUST00000119956 394 ntBASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gm32999-201ENSMUST00000192693 562 ntBASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gm8385-201ENSMUST00000058999 643 ntBASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf3Q9Z2L7 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf3Q9Z2L7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms