Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.57□□□□□ -0.4
Chaf1aQ9QWF0 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Gm8566-201ENSMUST00000120174 465 ntBASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Gm12196-201ENSMUST00000120954 262 ntBASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Gm8459-201ENSMUST00000162504 760 ntBASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Gm6722-201ENSMUST00000221586 390 ntBASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Gm4978-201ENSMUST00000071565 801 ntBASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.56□□□□□ -0.4
Chaf1aQ9QWF0 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Gm12579-201ENSMUST00000118040 783 ntBASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Gm25881-201ENSMUST00000157783 103 ntBASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Gm18734-201ENSMUST00000172937 808 ntBASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Gm6439-201ENSMUST00000199849 862 ntBASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1aQ9QWF0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Gm8815-201ENSMUST00000173809 620 ntBASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 Mir3102-201ENSMUST00000175555 104 ntBASIC12.54□□□□□ -0.4
Chaf1aQ9QWF0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms