Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm16166-201ENSMUST00000118291 787 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm9089-201ENSMUST00000122027 526 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm24398-201ENSMUST00000157870 109 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm37028-201ENSMUST00000194276 107 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm42518-201ENSMUST00000196277 938 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm8574-201ENSMUST00000203207 924 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdc40Q9DC48 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Gm20495-201ENSMUST00000173902 235 ntBASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Gm23153-201ENSMUST00000175323 313 ntBASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.42□□□□□ -0.74
Cdc40Q9DC48 CT025551.1-201ENSMUST00000223996 692 ntBASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms