Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Gm13035-201ENSMUST00000117496 342 ntBASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Gm12217-201ENSMUST00000118858 696 ntBASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 AU022133-201ENSMUST00000200601 873 ntBASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Gm44415-201ENSMUST00000204151 2112 ntBASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp4cQ9D7F7 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Gm7851-201ENSMUST00000117574 323 ntBASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Gm12247-201ENSMUST00000117585 670 ntBASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Gm11450-201ENSMUST00000121144 333 ntBASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Gm3150-201ENSMUST00000166418 204 ntBASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Mir6927-201ENSMUST00000184494 71 ntBASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp4cQ9D7F7 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Gm12266-201ENSMUST00000120311 962 ntBASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Gm13263-201ENSMUST00000121271 838 ntBASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Gm15549-201ENSMUST00000121595 622 ntBASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp4cQ9D7F7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms