Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim11Q99PQ2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim11Q99PQ2 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trim11Q99PQ2 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Trim11Q99PQ2 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim11Q99PQ2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.77□□□□□ -0.36
Trim11Q99PQ2 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Gm4909-201ENSMUST00000118749 794 ntBASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Gm23694-201ENSMUST00000179335 110 ntBASIC12.77□□□□□ -0.37
Trim11Q99PQ2 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim11Q99PQ2 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm12218-201ENSMUST00000117666 399 ntBASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm15352-201ENSMUST00000118696 270 ntBASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm16219-201ENSMUST00000120096 274 ntBASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm21778-201ENSMUST00000178779 471 ntBASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.76□□□□□ -0.37
Trim11Q99PQ2 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim11Q99PQ2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim11Q99PQ2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms