Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Gtf2a1Q99PM3 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Gtf2a1Q99PM3 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Gm12116-201ENSMUST00000131851 2770 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Gm43311-201ENSMUST00000200016 2377 ntBASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Gm30373-202ENSMUST00000217507 2709 ntTSL 5 BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Gm24158-201ENSMUST00000175263 71 ntBASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Gm9192-201ENSMUST00000183221 985 ntBASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Gm42859-201ENSMUST00000199572 193 ntBASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Gm5779-201ENSMUST00000218467 910 ntBASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Adal-202ENSMUST00000066155 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Piwil4-201ENSMUST00000076946 2637 ntTSL 2 BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC12.14□□□□□ -0.47
Gtf2a1Q99PM3 Cd101-201ENSMUST00000147399 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Nell1-202ENSMUST00000107603 2756 ntTSL 5 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Gm13315-201ENSMUST00000120376 991 ntBASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 9030619P08Rik-201ENSMUST00000096397 857 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Arhgap28-203ENSMUST00000164647 2754 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Pitrm1-207ENSMUST00000222485 3906 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Gm37593-201ENSMUST00000191669 3254 ntBASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gtf2a1Q99PM3 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 A230056P14Rik-201ENSMUST00000130189 2177 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Sf3b2-201ENSMUST00000025774 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Snx25-201ENSMUST00000041582 3206 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Snord83b-201ENSMUST00000104546 94 ntBASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Gm6415-201ENSMUST00000118488 348 ntBASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gtf2a1Q99PM3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms