Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm26391-201ENSMUST00000179843 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm6606-201ENSMUST00000193613 947 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm24089-201ENSMUST00000093696 109 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Gm27440-201ENSMUST00000184785 107 ntBASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.32□□□□□ -0.6
Smarcd2Q99JR8 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms