Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Gm25226-201ENSMUST00000158198 123 ntBASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Gm44888-201ENSMUST00000209119 2541 ntBASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Gm42741-201ENSMUST00000201340 2278 ntBASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc28bQ8CEG5 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm15207-201ENSMUST00000119259 442 ntBASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm11425-201ENSMUST00000119608 498 ntBASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm9396-201ENSMUST00000076703 567 ntBASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm21817-201ENSMUST00000178584 2583 ntBASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc28bQ8CEG5 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms