Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Gm9257-201ENSMUST00000221254 232 ntBASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 AC122881.1-201ENSMUST00000225757 2695 ntBASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Gm23251-201ENSMUST00000103773 110 ntBASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Gm11244-201ENSMUST00000121243 237 ntBASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Gm18367-201ENSMUST00000176139 600 ntBASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Gm7741-201ENSMUST00000181445 989 ntBASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Olfr584-201ENSMUST00000098210 964 ntBASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc38Q8CDN8 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms