Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp6nlQ80XC3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp6nlQ80XC3 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp6nlQ80XC3 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp6nlQ80XC3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp6nlQ80XC3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp6nlQ80XC3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp6nlQ80XC3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp6nlQ80XC3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Usp6nlQ80XC3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp6nlQ80XC3 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Usp6nlQ80XC3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp6nlQ80XC3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Gm23745-201ENSMUST00000104230 125 ntBASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Gm11475-201ENSMUST00000118482 476 ntBASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Snord55-201ENSMUST00000174939 79 ntBASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Trav11n-201ENSMUST00000200113 343 ntBASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Gm5340-201ENSMUST00000203733 880 ntBASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp6nlQ80XC3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Usp6nlQ80XC3 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Usp6nlQ80XC3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm25569-201ENSMUST00000157175 131 ntBASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm43547-201ENSMUST00000197729 328 ntBASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm9353-201ENSMUST00000200472 604 ntBASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm35960-201ENSMUST00000202712 767 ntBASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm26782-203ENSMUST00000227103 751 ntBASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm9791-201ENSMUST00000060997 447 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms