Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Gm25148-201ENSMUST00000104611 123 ntBASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Mir453-201ENSMUST00000104732 82 ntBASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Gm12218-201ENSMUST00000117666 399 ntBASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Gm3619-201ENSMUST00000219947 775 ntBASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh19Q80TF3 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Gm12628-201ENSMUST00000122193 382 ntBASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Gm22877-201ENSMUST00000175451 105 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms