Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm23949-201ENSMUST00000104027 127 ntBASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm12742-201ENSMUST00000117326 410 ntBASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm14127-201ENSMUST00000117906 678 ntBASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm13996-201ENSMUST00000118456 430 ntBASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm18062-201ENSMUST00000208020 547 ntBASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm18055-201ENSMUST00000208254 547 ntBASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scaf4Q6PFF0 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Nln-205ENSMUST00000224945 2486 ntBASIC11□□□□□ -0.65
Scaf4Q6PFF0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11□□□□□ -0.65
Scaf4Q6PFF0 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Gm24255-201ENSMUST00000104481 128 ntBASIC11□□□□□ -0.65
Scaf4Q6PFF0 Gm12247-201ENSMUST00000117585 670 ntBASIC11□□□□□ -0.65
Scaf4Q6PFF0 Gm14740-201ENSMUST00000118538 1150 ntBASIC11□□□□□ -0.65
Scaf4Q6PFF0 Gm12380-201ENSMUST00000119012 544 ntBASIC11□□□□□ -0.65
Scaf4Q6PFF0 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Gm6108-201ENSMUST00000208365 367 ntBASIC11□□□□□ -0.65
Scaf4Q6PFF0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Hyal2-206ENSMUST00000195681 2968 ntBASIC11□□□□□ -0.65
Scaf4Q6PFF0 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scaf4Q6PFF0 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scaf4Q6PFF0 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms