Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Gm22994-201ENSMUST00000175422 82 ntBASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Gm8643-201ENSMUST00000195228 625 ntBASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.97□□□□□ -0.33
Nup98Q6PFD9 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Gm13120-201ENSMUST00000117343 1446 ntBASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Gm13857-201ENSMUST00000139645 173 ntBASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup98Q6PFD9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Gm5510-201ENSMUST00000117826 486 ntBASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Atf7-201ENSMUST00000096143 390 ntBASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup98Q6PFD9 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup98Q6PFD9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup98Q6PFD9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms