Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Gm15808-201ENSMUST00000119046 604 ntBASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Gm25881-201ENSMUST00000157783 103 ntBASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Gm8100-201ENSMUST00000182906 988 ntBASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Gm7003-201ENSMUST00000195089 312 ntBASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smarcd3Q6P9Z1 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Gm13916-201ENSMUST00000117368 628 ntBASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Gm22846-201ENSMUST00000157706 270 ntBASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Gm18734-201ENSMUST00000172937 808 ntBASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Gm27530-201ENSMUST00000184096 98 ntBASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Gm45856-201ENSMUST00000212752 416 ntBASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms