Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Gm5051-201ENSMUST00000204085 485 ntBASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.52□□□□□ -0.41
Usp49Q6P9L4 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp49Q6P9L4 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Gm16071-201ENSMUST00000119589 793 ntBASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Gm13408-201ENSMUST00000119822 798 ntBASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Gm13935-201ENSMUST00000121859 798 ntBASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Gm27438-201ENSMUST00000183480 110 ntBASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Gm17826-201ENSMUST00000189720 798 ntBASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Gm44323-201ENSMUST00000198689 129 ntBASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Usp49Q6P9L4 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Gm13422-201ENSMUST00000118834 504 ntBASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Gm14585-201ENSMUST00000120713 634 ntBASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Gm45398-201ENSMUST00000210561 165 ntBASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp49Q6P9L4 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 183.7 ms