Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC14.31□□□□□ -0.12
Clcn1Q64347 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Clcn1Q64347 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm16167-201ENSMUST00000160428 1065 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
Clcn1Q64347 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm25998-201ENSMUST00000175397 53 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm36982-201ENSMUST00000193796 1128 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm43506-201ENSMUST00000200675 753 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm6855-201ENSMUST00000206307 790 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm44814-201ENSMUST00000207018 434 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC14.31□□□□□ -0.12
Clcn1Q64347 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 BC106175-202ENSMUST00000219344 1213 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm19540-201ENSMUST00000221843 810 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.31□□□□□ -0.12
Clcn1Q64347 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Clcn1Q64347 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Clcn1Q64347 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC14.3□□□□□ -0.12
Clcn1Q64347 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC14.3□□□□□ -0.12
Clcn1Q64347 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm5555-201ENSMUST00000120352 1111 ntBASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC14.3□□□□□ -0.12
Clcn1Q64347 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm45135-201ENSMUST00000206787 1184 ntBASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm45085-201ENSMUST00000209100 441 ntBASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm45610-201ENSMUST00000209227 784 ntBASIC14.3□□□□□ -0.12
Clcn1Q64347 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Id2-203ENSMUST00000222667 958 ntBASIC14.3□□□□□ -0.12
Clcn1Q64347 AC154616.1-201ENSMUST00000226995 804 ntBASIC14.3□□□□□ -0.12
Clcn1Q64347 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Clcn1Q64347 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm9244-201ENSMUST00000056767 2129 ntBASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm5171-201ENSMUST00000214944 1415 ntBASIC14.3□□□□□ -0.12
Clcn1Q64347 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clcn1Q64347 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm14165-201ENSMUST00000121456 952 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm8451-201ENSMUST00000170338 447 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC14.29□□□□□ -0.12
Clcn1Q64347 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm9102-201ENSMUST00000219250 465 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms