Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.78□□□□□ -0.68
ClpbQ60649 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
ClpbQ60649 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
ClpbQ60649 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.77□□□□□ -0.68
ClpbQ60649 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
ClpbQ60649 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
ClpbQ60649 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
ClpbQ60649 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
ClpbQ60649 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
ClpbQ60649 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
ClpbQ60649 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
ClpbQ60649 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
ClpbQ60649 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
ClpbQ60649 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
ClpbQ60649 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
ClpbQ60649 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
ClpbQ60649 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.77□□□□□ -0.68
ClpbQ60649 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
ClpbQ60649 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.77□□□□□ -0.69
ClpbQ60649 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
ClpbQ60649 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
ClpbQ60649 Gm11667-201ENSMUST00000119828 486 ntBASIC10.77□□□□□ -0.69
ClpbQ60649 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.77□□□□□ -0.69
ClpbQ60649 Gm18367-201ENSMUST00000176139 600 ntBASIC10.77□□□□□ -0.69
ClpbQ60649 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.77□□□□□ -0.69
ClpbQ60649 Mir8115-201ENSMUST00000184992 119 ntBASIC10.77□□□□□ -0.69
ClpbQ60649 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.77□□□□□ -0.69
ClpbQ60649 Gm8574-201ENSMUST00000203207 924 ntBASIC10.77□□□□□ -0.69
ClpbQ60649 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.77□□□□□ -0.69
ClpbQ60649 Gm44008-201ENSMUST00000204345 412 ntBASIC10.77□□□□□ -0.69
ClpbQ60649 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.77□□□□□ -0.69
ClpbQ60649 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.77□□□□□ -0.69
ClpbQ60649 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.77□□□□□ -0.69
ClpbQ60649 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
ClpbQ60649 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
ClpbQ60649 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.77□□□□□ -0.69
ClpbQ60649 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.77□□□□□ -0.69
ClpbQ60649 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
ClpbQ60649 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.77□□□□□ -0.69
ClpbQ60649 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClpbQ60649 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
ClpbQ60649 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.76□□□□□ -0.69
ClpbQ60649 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.76□□□□□ -0.69
ClpbQ60649 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.76□□□□□ -0.69
ClpbQ60649 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
ClpbQ60649 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
ClpbQ60649 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.76□□□□□ -0.69
ClpbQ60649 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.76□□□□□ -0.69
ClpbQ60649 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
ClpbQ60649 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
ClpbQ60649 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC10.76□□□□□ -0.69
ClpbQ60649 Gm12463-201ENSMUST00000118271 849 ntBASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms