Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gm15661-201ENSMUST00000117390 556 ntBASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gm12463-201ENSMUST00000118271 849 ntBASIC10.28□□□□□ -0.76
Spg11Q3UHA3 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gm13857-201ENSMUST00000139645 173 ntBASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gm6098-201ENSMUST00000180234 330 ntBASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gm3116-201ENSMUST00000189440 1116 ntBASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gm10015-201ENSMUST00000072570 465 ntBASIC10.28□□□□□ -0.76
Spg11Q3UHA3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Dcstamp-205ENSMUST00000228556 1684 ntBASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Spg11Q3UHA3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Gm8864-201ENSMUST00000118653 1010 ntBASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Gm23563-201ENSMUST00000174900 251 ntBASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Spg11Q3UHA3 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Gm12415-201ENSMUST00000141637 512 ntTSL 3 BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Gm5501-201ENSMUST00000165917 832 ntBASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Gm37944-201ENSMUST00000194233 414 ntBASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Gm42859-201ENSMUST00000199572 193 ntBASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 AC159899.1-201ENSMUST00000214024 733 ntBASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Gm6129-201ENSMUST00000220725 801 ntBASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Spg11Q3UHA3 AC147366.2-201ENSMUST00000226859 2038 ntBASIC10.27□□□□□ -0.77
Spg11Q3UHA3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Spg11Q3UHA3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Spg11Q3UHA3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Spg11Q3UHA3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Spg11Q3UHA3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.26□□□□□ -0.77
Spg11Q3UHA3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Spg11Q3UHA3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.26□□□□□ -0.77
Spg11Q3UHA3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms