Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Gm29304-201ENSMUST00000186555 695 ntBASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Gm29223-201ENSMUST00000188867 695 ntBASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Gm37921-201ENSMUST00000194333 695 ntBASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Gm9619-201ENSMUST00000211587 762 ntBASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 AC187103.3-201ENSMUST00000225725 646 ntBASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Nsmce2-203ENSMUST00000227173 1122 ntBASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Gm19027-201ENSMUST00000187291 1355 ntBASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chrna5Q2MKA5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chrna5Q2MKA5 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chrna5Q2MKA5 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Chrna5Q2MKA5 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chrna5Q2MKA5 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chrna5Q2MKA5 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.27□□□□□ -0.28
Chrna5Q2MKA5 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chrna5Q2MKA5 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chrna5Q2MKA5 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chrna5Q2MKA5 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chrna5Q2MKA5 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC13.27□□□□□ -0.28
Chrna5Q2MKA5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Gm23604-201ENSMUST00000104311 132 ntBASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Gm4943-201ENSMUST00000132879 424 ntBASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Gm27316-201ENSMUST00000184884 277 ntBASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Gm29808-201ENSMUST00000194419 468 ntBASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Gm5278-201ENSMUST00000055957 552 ntBASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 AC151836.1-201ENSMUST00000228730 1637 ntBASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC13.27□□□□□ -0.29
Chrna5Q2MKA5 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Gm23439-201ENSMUST00000104292 132 ntBASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Gm13700-201ENSMUST00000118624 1128 ntBASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Gm16288-201ENSMUST00000137940 367 ntBASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Gm8601-201ENSMUST00000182096 909 ntBASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Gm27444-201ENSMUST00000184157 137 ntBASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Gm45745-201ENSMUST00000211447 1180 ntBASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Gm45893-201ENSMUST00000211899 247 ntBASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna5Q2MKA5 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms