Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CiitaP79621 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CiitaP79621 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CiitaP79621 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CiitaP79621 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CiitaP79621 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CiitaP79621 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Gm14592-201ENSMUST00000117201 560 ntBASIC12.13□□□□□ -0.47
CiitaP79621 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.13□□□□□ -0.47
CiitaP79621 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.13□□□□□ -0.47
CiitaP79621 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Gm23218-201ENSMUST00000158124 276 ntBASIC12.13□□□□□ -0.47
CiitaP79621 Gm8723-201ENSMUST00000166076 820 ntBASIC12.13□□□□□ -0.47
CiitaP79621 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CiitaP79621 Gm8701-201ENSMUST00000169259 874 ntBASIC12.13□□□□□ -0.47
CiitaP79621 Gm19927-201ENSMUST00000185792 781 ntBASIC12.13□□□□□ -0.47
CiitaP79621 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Gm5298-201ENSMUST00000201122 892 ntBASIC12.13□□□□□ -0.47
CiitaP79621 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.13□□□□□ -0.47
CiitaP79621 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CiitaP79621 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CiitaP79621 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.13□□□□□ -0.47
CiitaP79621 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CiitaP79621 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CiitaP79621 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.12□□□□□ -0.47
CiitaP79621 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CiitaP79621 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CiitaP79621 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.12□□□□□ -0.47
CiitaP79621 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Gm11560-201ENSMUST00000117567 948 ntBASIC12.12□□□□□ -0.47
CiitaP79621 Gm13445-201ENSMUST00000121664 307 ntBASIC12.12□□□□□ -0.47
CiitaP79621 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.12□□□□□ -0.47
CiitaP79621 Mir1905-201ENSMUST00000122779 82 ntBASIC12.12□□□□□ -0.47
CiitaP79621 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.12□□□□□ -0.47
CiitaP79621 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.12□□□□□ -0.47
CiitaP79621 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.12□□□□□ -0.47
CiitaP79621 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.12□□□□□ -0.47
CiitaP79621 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.12□□□□□ -0.47
CiitaP79621 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Gm26976-201ENSMUST00000182929 908 ntBASIC12.12□□□□□ -0.47
CiitaP79621 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.12□□□□□ -0.47
CiitaP79621 Gm8255-201ENSMUST00000218693 305 ntBASIC12.12□□□□□ -0.47
CiitaP79621 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.12□□□□□ -0.47
CiitaP79621 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CiitaP79621 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CiitaP79621 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.12□□□□□ -0.47
CiitaP79621 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CiitaP79621 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
CiitaP79621 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CiitaP79621 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CiitaP79621 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CiitaP79621 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CiitaP79621 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CiitaP79621 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms