Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Traf6P70196 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Traf6P70196 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Traf6P70196 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Traf6P70196 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Traf6P70196 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Traf6P70196 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Traf6P70196 Gm44286-201ENSMUST00000204098 1487 ntBASIC11.12□□□□□ -0.63
Traf6P70196 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.12□□□□□ -0.63
Traf6P70196 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Traf6P70196 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.11□□□□□ -0.63
Traf6P70196 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Traf6P70196 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Traf6P70196 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Traf6P70196 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Traf6P70196 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC11.11□□□□□ -0.63
Traf6P70196 Gm25881-201ENSMUST00000157783 103 ntBASIC11.11□□□□□ -0.63
Traf6P70196 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC11.11□□□□□ -0.63
Traf6P70196 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.11□□□□□ -0.63
Traf6P70196 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.11□□□□□ -0.63
Traf6P70196 Gm18730-201ENSMUST00000218038 343 ntBASIC11.11□□□□□ -0.63
Traf6P70196 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.11□□□□□ -0.63
Traf6P70196 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.11□□□□□ -0.63
Traf6P70196 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
Traf6P70196 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.11□□□□□ -0.63
Traf6P70196 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Traf6P70196 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Traf6P70196 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Traf6P70196 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Traf6P70196 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Traf6P70196 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Traf6P70196 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Traf6P70196 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Traf6P70196 Gm14724-201ENSMUST00000118400 537 ntBASIC11.1□□□□□ -0.63
Traf6P70196 Gm4909-201ENSMUST00000118749 794 ntBASIC11.1□□□□□ -0.63
Traf6P70196 Gm8199-201ENSMUST00000121323 823 ntBASIC11.1□□□□□ -0.63
Traf6P70196 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.1□□□□□ -0.63
Traf6P70196 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Traf6P70196 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.1□□□□□ -0.63
Traf6P70196 Gm18753-201ENSMUST00000201000 566 ntBASIC11.1□□□□□ -0.63
Traf6P70196 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Traf6P70196 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.1□□□□□ -0.63
Traf6P70196 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.1□□□□□ -0.63
Traf6P70196 Gm6722-201ENSMUST00000221586 390 ntBASIC11.1□□□□□ -0.63
Traf6P70196 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Traf6P70196 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.1□□□□□ -0.63
Traf6P70196 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Traf6P70196 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Traf6P70196 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Traf6P70196 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Traf6P70196 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Traf6P70196 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Traf6P70196 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Traf6P70196 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Traf6P70196 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Traf6P70196 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Traf6P70196 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Traf6P70196 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Traf6P70196 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Traf6P70196 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Traf6P70196 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Traf6P70196 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.09□□□□□ -0.63
Traf6P70196 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Traf6P70196 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms