Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ybx1P62960 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.49□□□□□ -0.57
Ybx1P62960 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ybx1P62960 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ybx1P62960 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Ybx1P62960 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.49□□□□□ -0.57
Ybx1P62960 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Ybx1P62960 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Gm3329-201ENSMUST00000159873 556 ntBASIC11.49□□□□□ -0.57
Ybx1P62960 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Ybx1P62960 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.49□□□□□ -0.57
Ybx1P62960 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.49□□□□□ -0.57
Ybx1P62960 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ybx1P62960 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ybx1P62960 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.49□□□□□ -0.57
Ybx1P62960 Gm43930-201ENSMUST00000203868 845 ntBASIC11.49□□□□□ -0.57
Ybx1P62960 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.49□□□□□ -0.57
Ybx1P62960 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.49□□□□□ -0.57
Ybx1P62960 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.49□□□□□ -0.57
Ybx1P62960 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.49□□□□□ -0.57
Ybx1P62960 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ybx1P62960 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.49□□□□□ -0.57
Ybx1P62960 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ybx1P62960 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ybx1P62960 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.49□□□□□ -0.57
Ybx1P62960 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ybx1P62960 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ybx1P62960 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.49□□□□□ -0.57
Ybx1P62960 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Ybx1P62960 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.49□□□□□ -0.57
Ybx1P62960 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ybx1P62960 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.49□□□□□ -0.57
Ybx1P62960 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ybx1P62960 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ybx1P62960 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Ybx1P62960 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Gm23612-201ENSMUST00000103823 110 ntBASIC11.48□□□□□ -0.57
Ybx1P62960 Gm13981-201ENSMUST00000122360 447 ntBASIC11.48□□□□□ -0.57
Ybx1P62960 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.48□□□□□ -0.57
Ybx1P62960 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.48□□□□□ -0.57
Ybx1P62960 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ybx1P62960 Gm25998-201ENSMUST00000175397 53 ntBASIC11.48□□□□□ -0.57
Ybx1P62960 Gm26272-201ENSMUST00000179241 132 ntBASIC11.48□□□□□ -0.57
Ybx1P62960 Gm23576-201ENSMUST00000179918 110 ntBASIC11.48□□□□□ -0.57
Ybx1P62960 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.48□□□□□ -0.57
Ybx1P62960 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.48□□□□□ -0.57
Ybx1P62960 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ybx1P62960 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Ybx1P62960 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.48□□□□□ -0.57
Ybx1P62960 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Ybx1P62960 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms