Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Lsm6P62313 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Lsm6P62313 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Lsm6P62313 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Lsm6P62313 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Gm15528-201ENSMUST00000117821 864 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 Gm11956-201ENSMUST00000119525 512 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 Gm25492-201ENSMUST00000157383 129 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.85□□□□□ -0.83
Lsm6P62313 Gm5302-201ENSMUST00000202130 796 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 Gm17831-201ENSMUST00000205579 900 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.85□□□□□ -0.83
Lsm6P62313 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Lsm6P62313 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Lsm6P62313 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Lsm6P62313 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.85□□□□□ -0.83
Lsm6P62313 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm6P62313 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.84□□□□□ -0.83
Lsm6P62313 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Lsm6P62313 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Lsm6P62313 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.84□□□□□ -0.83
Lsm6P62313 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Lsm6P62313 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Gm14395-201ENSMUST00000120494 563 ntBASIC9.84□□□□□ -0.83
Lsm6P62313 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC9.84□□□□□ -0.83
Lsm6P62313 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.84□□□□□ -0.83
Lsm6P62313 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.84□□□□□ -0.83
Lsm6P62313 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.84□□□□□ -0.83
Lsm6P62313 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.84□□□□□ -0.83
Lsm6P62313 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms