Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Lmo4P61969 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Lmo4P61969 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Lmo4P61969 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Lmo4P61969 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Lmo4P61969 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.03□□□□□ -0.96
Lmo4P61969 Gm13047-201ENSMUST00000117116 815 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm11993-201ENSMUST00000121861 820 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm11354-201ENSMUST00000121974 422 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC9.03□□□□□ -0.96
Lmo4P61969 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Lmo4P61969 Gm23400-201ENSMUST00000174994 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm26463-201ENSMUST00000175065 101 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm24332-201ENSMUST00000175102 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm25959-201ENSMUST00000175112 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm22475-201ENSMUST00000175169 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm22903-201ENSMUST00000175193 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm25070-201ENSMUST00000175237 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm24159-201ENSMUST00000175264 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm25299-201ENSMUST00000175283 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm23798-201ENSMUST00000175560 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm23802-201ENSMUST00000175565 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm25708-201ENSMUST00000177687 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm24370-201ENSMUST00000178007 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm23049-201ENSMUST00000178068 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm28019-201ENSMUST00000178138 101 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm25571-201ENSMUST00000178322 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm25355-201ENSMUST00000178456 101 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm24975-201ENSMUST00000178492 101 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm23189-201ENSMUST00000178954 102 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm25100-201ENSMUST00000179750 101 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm23064-201ENSMUST00000179866 101 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm9162-201ENSMUST00000182081 991 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Mir6923-201ENSMUST00000184592 72 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Platr10-202ENSMUST00000191479 818 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm5267-201ENSMUST00000191574 1045 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Lmo4P61969 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Lmo4P61969 AC134601.2-201ENSMUST00000221071 130 ntBASIC9.03□□□□□ -0.96
Lmo4P61969 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Lmo4P61969 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC9.03□□□□□ -0.96
Lmo4P61969 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Lmo4P61969 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Lmo4P61969 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Lmo4P61969 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC9.03□□□□□ -0.96
Lmo4P61969 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Lmo4P61969 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Lmo4P61969 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Lmo4P61969 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Lmo4P61969 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Lmo4P61969 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Lmo4P61969 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Lmo4P61969 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.02□□□□□ -0.97
Lmo4P61969 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Lmo4P61969 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Lmo4P61969 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms