Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm26286-201ENSMUST00000104166 134 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm13035-201ENSMUST00000117496 342 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm3332-201ENSMUST00000189337 928 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm8956-201ENSMUST00000203939 825 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm21811-201ENSMUST00000096485 930 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Erich3-203ENSMUST00000189969 3460 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Spata33-207ENSMUST00000212760 4074 ntBASIC9.88□□□□□ -0.83
Sec61a1P61620 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.88□□□□□ -0.83
Sec61a1P61620 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.88□□□□□ -0.83
Sec61a1P61620 Gm18893-201ENSMUST00000198416 943 ntBASIC9.88□□□□□ -0.83
Sec61a1P61620 Gm43378-201ENSMUST00000199336 582 ntBASIC9.88□□□□□ -0.83
Sec61a1P61620 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Spcs1-203ENSMUST00000226374 592 ntBASIC9.88□□□□□ -0.83
Sec61a1P61620 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.88□□□□□ -0.83
Sec61a1P61620 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.88□□□□□ -0.83
Sec61a1P61620 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.88□□□□□ -0.83
Sec61a1P61620 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61a1P61620 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms