Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup43P59235 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.59□□□□□ -0.71
Nup43P59235 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nup43P59235 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.59□□□□□ -0.71
Nup43P59235 Gm44126-201ENSMUST00000204831 514 ntBASIC10.59□□□□□ -0.71
Nup43P59235 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Nup43P59235 Mt1-202ENSMUST00000211807 1085 ntBASIC10.59□□□□□ -0.71
Nup43P59235 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.59□□□□□ -0.71
Nup43P59235 CT010431.1-201ENSMUST00000221249 1080 ntBASIC10.59□□□□□ -0.71
Nup43P59235 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nup43P59235 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nup43P59235 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.59□□□□□ -0.71
Nup43P59235 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nup43P59235 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Nup43P59235 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup43P59235 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nup43P59235 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup43P59235 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nup43P59235 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup43P59235 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nup43P59235 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nup43P59235 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup43P59235 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup43P59235 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Nup43P59235 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Nup43P59235 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Nup43P59235 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Nup43P59235 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Nup43P59235 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Nup43P59235 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Nup43P59235 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Nup43P59235 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Nup43P59235 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Nup43P59235 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.58□□□□□ -0.72
Nup43P59235 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Nup43P59235 Gm13888-201ENSMUST00000119148 422 ntBASIC10.58□□□□□ -0.72
Nup43P59235 Gm1848-201ENSMUST00000120711 789 ntBASIC10.58□□□□□ -0.72
Nup43P59235 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.58□□□□□ -0.72
Nup43P59235 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.58□□□□□ -0.72
Nup43P59235 AC154634.3-201ENSMUST00000224589 736 ntBASIC10.58□□□□□ -0.72
Nup43P59235 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.58□□□□□ -0.72
Nup43P59235 Gm10020-201ENSMUST00000081993 612 ntBASIC10.58□□□□□ -0.72
Nup43P59235 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.58□□□□□ -0.72
Nup43P59235 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Nup43P59235 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.58□□□□□ -0.72
Nup43P59235 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup43P59235 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.58□□□□□ -0.72
Nup43P59235 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.57□□□□□ -0.72
Nup43P59235 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Nup43P59235 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC10.57□□□□□ -0.72
Nup43P59235 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.57□□□□□ -0.72
Nup43P59235 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Mir7076-201ENSMUST00000183519 74 ntBASIC10.57□□□□□ -0.72
Nup43P59235 Gm17877-201ENSMUST00000192578 814 ntBASIC10.57□□□□□ -0.72
Nup43P59235 Gm44323-201ENSMUST00000198689 129 ntBASIC10.57□□□□□ -0.72
Nup43P59235 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Nup43P59235 Gm10109-202ENSMUST00000206890 1211 ntBASIC10.57□□□□□ -0.72
Nup43P59235 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.57□□□□□ -0.72
Nup43P59235 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Nup43P59235 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms