Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.76□□□□□ -0.69
Prox1P48437 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.76□□□□□ -0.69
Prox1P48437 Nln-205ENSMUST00000224945 2486 ntBASIC10.76□□□□□ -0.69
Prox1P48437 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Gm22133-201ENSMUST00000102082 109 ntBASIC10.76□□□□□ -0.69
Prox1P48437 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Prox1P48437 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Prox1P48437 Gm26047-201ENSMUST00000157308 113 ntBASIC10.76□□□□□ -0.69
Prox1P48437 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.76□□□□□ -0.69
Prox1P48437 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.76□□□□□ -0.69
Prox1P48437 Gm26047-202ENSMUST00000198840 115 ntBASIC10.76□□□□□ -0.69
Prox1P48437 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.76□□□□□ -0.69
Prox1P48437 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.76□□□□□ -0.69
Prox1P48437 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.76□□□□□ -0.69
Prox1P48437 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.76□□□□□ -0.69
Prox1P48437 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.76□□□□□ -0.69
Prox1P48437 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Prox1P48437 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.76□□□□□ -0.69
Prox1P48437 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Prox1P48437 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Prox1P48437 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.76□□□□□ -0.69
Prox1P48437 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.76□□□□□ -0.69
Prox1P48437 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Prox1P48437 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Prox1P48437 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Prox1P48437 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Prox1P48437 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Prox1P48437 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Prox1P48437 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.75□□□□□ -0.69
Prox1P48437 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.75□□□□□ -0.69
Prox1P48437 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC10.75□□□□□ -0.69
Prox1P48437 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Prox1P48437 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Prox1P48437 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Prox1P48437 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Gm13296-201ENSMUST00000117854 997 ntBASIC10.75□□□□□ -0.69
Prox1P48437 Gm12463-201ENSMUST00000118271 849 ntBASIC10.75□□□□□ -0.69
Prox1P48437 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.75□□□□□ -0.69
Prox1P48437 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.75□□□□□ -0.69
Prox1P48437 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.75□□□□□ -0.69
Prox1P48437 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.75□□□□□ -0.69
Prox1P48437 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.75□□□□□ -0.69
Prox1P48437 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Prox1P48437 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Prox1P48437 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.75□□□□□ -0.69
Prox1P48437 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prox1P48437 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Prox1P48437 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.74□□□□□ -0.69
Prox1P48437 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.74□□□□□ -0.69
Prox1P48437 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms